Vertebrates : Danio rerio

Codon Usage

Codon Usage
Chart type: Bar (Switch to line)



Sequence region to calculate data (%)




Sequence Region (%): From to






Genome statistics
Sequence count
Genome total52089
Filtered set52089 (no filters used)
Correlation1
View sequences in FASTA
AminoAcidCodonTotal %Selected %Total CountSelected Count
SerineTCA0.1750.175414916414916
TCC0.1750.175414965414965
TCG0.0580.058138275138275
TCT0.2090.209494450494450
AGC0.2130.213504297504297
AGT0.1680.168397607397607
PhenylalanineTTC0.5230.523523531523531
TTT0.4770.477477029477029
LeucineTTA0.0760.076193227193227
TTG0.1310.131332295332295
CTA0.0720.072183357183357
CTC0.1820.182461374461374
CTG0.3980.39810107021010702
CTT0.1410.141358019358019
TyrosineTAC0.5640.564419036419036
TAT0.4360.436324591324591
StopTAA0.3390.3391552315523
TAG0.1770.17781068106
TGA0.4840.4842218922189
CysteineTGC0.4690.469291781291781
TGT0.5310.531330793330793
TryptophanTGG11299724299724
ProlineCCA0.3140.314454423454423
CCC0.2280.228330844330844
CCG0.1350.135196029196029
CCT0.3230.323467394467394
HistidineCAC0.5690.569407757407757
CAT0.4310.431309317309317
GlutamineCAA0.2790.279355688355688
CAG0.7210.721920130920130
ArginineCGA0.1230.123180324180324
CGC0.1660.166244357244357
CGG0.1160.116169904169904
CGT0.1230.123181397181397
AGA0.2820.282414097414097
AGG0.1910.191280189280189
IsoleucineATA0.1680.168212283212283
ATC0.4870.487614891614891
ATT0.3450.345434732434732
MethionineATG11644759644759
ThreonineACA0.3260.326496176496176
ACC0.2770.277420682420682
ACG0.1220.122185163185163
ACT0.2750.275418418418418
AsparagineAAC0.5790.579626990626990
AAT0.4210.421456251456251
LysineAAA0.5010.501800080800080
AAG0.4990.499795899795899
ValineGTA0.1090.109182619182619
GTC0.230.23385464385464
GTG0.4380.438732710732710
GTT0.2230.223372581372581
AlanineGCA0.2660.266442293442293
GCC0.2890.289480899480899
GCG0.1150.115191513191513
GCT0.330.33548288548288
AsparticGAC0.5130.513721463721463
GAT0.4870.487684414684414
GlutamicGAA0.3740.374696442696442
GAG0.6260.62611671291167129
GlycineGGA0.3540.354568477568477
GGC0.2650.265425196425196
GGG0.1630.163261293261293
GGT0.2190.219351831351831
Please cite: JetGene: Internet Resource for Analysis of Regulatory Regions or Nucleotide Contexts in Differentially Translated Plant Transcripts.
N. S. Sadovskaya, O. N. Mustafaev, A. A. Tyurin, I. V. Deineko & I. V. Goldenkova-Pavlova
Russian Journal of Plant Physiology volume 68, pages 633–640 (2021)