Vertebrates : Danio rerio

WGS Analysis tools

Division: Vertebrates

Species name: Zebrafish

Assembly: GRCz11

CDS quantity in database: 52089

CDNA quantity in database: 57775

3' UTR quantity in database: 0

5' UTR quantity in database: 0

Last update: 2023-03-14

Data source: Ensembl

Lineage:

Eukaryota (82) → Opisthokonta (82) → Metazoa (81) → Eumetazoa (81) → Bilateria (81) → Deuterostomia (79) → Chordata (79) → Craniata (77) → Vertebrata (77) → Gnathostomata (76) → Teleostomi (76) → Euteleostomi (76) → Actinopterygii (11) → Actinopteri (11) → Neopterygii (11) → Teleostei (10) → Osteoglossocephalai (10) → Clupeocephala (10) → Otomorpha (2) → Ostariophysi (2) → Otophysi (2) → Cypriniphysae (1) → Cypriniformes (1) → Cyprinoidea (1) → Cyprinidae (1) → Danio (1)


Sequence properties GOGene Ontology Annotations CDS DataSeq distr Codon Usage AminoAcid Position Codon Position CDS Length CpG-Island in CDS GC-Content in CDS Nucleotide by Position in CDS Adenine in CDS Cytosine in CDS Guanine in CDS Thymine in CDS Gene Names Transcript names Chromosome Strand Motifs K-Mers CDNA DataCDNA Length CpG-Island in CDNA GC-Content in CNDA Nucleotide by Position in CDNA Adenine in CDNA Cytosine in CDNA Guanine in CDNA Thymine in CDNA Gene Names Transcript names Chromosome Strand Motifs K-Mers
Please cite: JetGene: Internet Resource for Analysis of Regulatory Regions or Nucleotide Contexts in Differentially Translated Plant Transcripts.
N. S. Sadovskaya, O. N. Mustafaev, A. A. Tyurin, I. V. Deineko & I. V. Goldenkova-Pavlova
Russian Journal of Plant Physiology volume 68, pages 633–640 (2021)