Plants : Vitis vinifera

Thymine in CDS

Sequence Distribution depending on Thymine concentration in CDS
Chart type: Bar (Switch to line)

Sequence region to calculate data (%)




Sequence Region (%): From to

Block size:

Values interval to calculate data




Values: From to




Genome statistics
Sequence count
Genome total41097
Filtered set41097 (no filters used)
Correlation1
View sequences in FASTA
#Thymine Concentration (%)In GenomeIn Selected Set
1 811
2 933
3 1077
4 111414
5 121616
6 132525
7 144444
8 156060
9 16109109
10 17173173
11 18302302
12 19475475
13 20770770
14 2110361036
15 2215931593
16 2322982298
17 2429782978
18 2539903990
19 2648924892
20 2753105310
21 2852165216
22 2941764176
23 3029012901
24 3118871887
25 3211541154
26 33708708
27 34419419
28 35230230
29 36120120
30 377777
31 384141
32 394242
33 401414
34 4177
35 4266
36 4311
37 4422

 
Sequence properties GOGene Ontology Annotations CDS DataSeq distr Codon Usage AminoAcid Position Codon Position CDS Length CpG-Island in CDS GC-Content in CDS Nucleotide by Position in CDS Adenine in CDS Cytosine in CDS Guanine in CDS Thymine in CDS Gene Names Transcript names Chromosome Strand Motifs K-Mers CDNA DataCDNA Length CpG-Island in CDNA GC-Content in CNDA Nucleotide by Position in CDNA Adenine in CDNA Cytosine in CDNA Guanine in CDNA Thymine in CDNA Gene Names Transcript names Chromosome Strand Motifs K-Mers 5' UTR Data5' UTR Length CpG-Island in 5' UTR GC-Content in 5' UTR Nucleotide by Position in 5' UTR Adenine in 5' UTR Cytosine in 5' UTR Guanine in 5' UTR Thymine in 5' UTR Gene Names Transcript names Chromosome Strand Motifs K-Mers 3' UTR Data3' UTR Length CpG-Island in 3' UTR GC-Content in 3' UTR Nucleotide by Position in 3' UTR Adenine in 3' UTR Cytosine in 3' UTR Guanine in 3' UTR Thymine in 3' UTR Gene Names Transcript names Chromosome Strand Motifs K-Mers
Please cite: JetGene: Internet Resource for Analysis of Regulatory Regions or Nucleotide Contexts in Differentially Translated Plant Transcripts.
N. S. Sadovskaya, O. N. Mustafaev, A. A. Tyurin, I. V. Deineko & I. V. Goldenkova-Pavlova
Russian Journal of Plant Physiology volume 68, pages 633–640 (2021)