Plants : Sorghum bicolor

Thymine in CDNA

Sequence Distribution depending on Thymine concentration in CDNA
Chart type: Bar (Switch to line)

Sequence region to calculate data (%)




Sequence Region (%): From to

Block size:

Values interval to calculate data




Values: From to




Genome statistics
Sequence count
Genome total47110
Filtered set47110 (no filters used)
Correlation1
View sequences in FASTA
#Thymine Concentration (%)In GenomeIn Selected Set
1 744
2 877
3 92424
4 104545
5 119999
6 12167167
7 13335335
8 14541541
9 15670670
10 16848848
11 1711321132
12 1814071407
13 1917441744
14 2020522052
15 2123482348
16 2226692669
17 2331153115
18 2437503750
19 2542034203
20 2646254625
21 2740154015
22 2837483748
23 2930913091
24 3024012401
25 3116031603
26 3210411041
27 33637637
28 34350350
29 35176176
30 369999
31 375858
32 384646
33 392626
34 4088
35 4166
36 421010
37 4377
38 4411
39 4811
40 5111

 
Sequence properties GOGene Ontology Annotations CDS DataSeq distr Codon Usage AminoAcid Position Codon Position CDS Length CpG-Island in CDS GC-Content in CDS Nucleotide by Position in CDS Adenine in CDS Cytosine in CDS Guanine in CDS Thymine in CDS Gene Names Transcript names Chromosome Strand Motifs K-Mers CDNA DataCDNA Length CpG-Island in CDNA GC-Content in CNDA Nucleotide by Position in CDNA Adenine in CDNA Cytosine in CDNA Guanine in CDNA Thymine in CDNA Gene Names Transcript names Chromosome Strand Motifs K-Mers 5' UTR Data5' UTR Length CpG-Island in 5' UTR GC-Content in 5' UTR Nucleotide by Position in 5' UTR Adenine in 5' UTR Cytosine in 5' UTR Guanine in 5' UTR Thymine in 5' UTR Gene Names Transcript names Chromosome Strand Motifs K-Mers 3' UTR Data3' UTR Length CpG-Island in 3' UTR GC-Content in 3' UTR Nucleotide by Position in 3' UTR Adenine in 3' UTR Cytosine in 3' UTR Guanine in 3' UTR Thymine in 3' UTR Gene Names Transcript names Chromosome Strand Motifs K-Mers
Please cite: JetGene: Internet Resource for Analysis of Regulatory Regions or Nucleotide Contexts in Differentially Translated Plant Transcripts.
N. S. Sadovskaya, O. N. Mustafaev, A. A. Tyurin, I. V. Deineko & I. V. Goldenkova-Pavlova
Russian Journal of Plant Physiology volume 68, pages 633–640 (2021)