Plants : Sorghum bicolor

Cytosine in 5' UTR

Sequence Distribution depending on Cytosine concentration in 5' Untranslated Region
Chart type: Bar (Switch to line)

Sequence region to calculate data (%)




Sequence Region (%): From to

Block size:

Values interval to calculate data




Values: From to




Genome statistics
Sequence count
Genome total34257
Filtered set34257 (no filters used)
Correlation1
View sequences in FASTA
#Cytosine Concentration (%)In GenomeIn Selected Set
1 0106106
2 311
3 433
4 51212
5 61515
6 71717
7 82828
8 92626
9 104343
10 114444
11 129191
12 13107107
13 14161161
14 15234234
15 16330330
16 17488488
17 18726726
18 19928928
19 2011381138
20 2112881288
21 2213381338
22 2313771377
23 2413831383
24 2514151415
25 2613641364
26 2713141314
27 2813311331
28 2912431243
29 3011371137
30 3112941294
31 3211631163
32 3312141214
33 3410551055
34 3510631063
35 3610631063
36 37878878
37 3810601060
38 39841841
39 40854854
40 41754754
41 42724724
42 43667667
43 44625625
44 45627627
45 46450450
46 47391391
47 48354354
48 49276276
49 50288288
50 51198198
51 52145145
52 53122122
53 547979
54 556565
55 566666
56 576262
57 584848
58 593434
59 601616
60 6177
61 621111
62 6399
63 6433
64 6533
65 6622
66 672020
67 6822
68 6911
69 7011
70 7111
71 7322
72 7522
73 8033
74 8311
75 8611
76 8811

 
Sequence properties GOGene Ontology Annotations CDS DataSeq distr Codon Usage AminoAcid Position Codon Position CDS Length CpG-Island in CDS GC-Content in CDS Nucleotide by Position in CDS Adenine in CDS Cytosine in CDS Guanine in CDS Thymine in CDS Gene Names Transcript names Chromosome Strand Motifs K-Mers CDNA DataCDNA Length CpG-Island in CDNA GC-Content in CNDA Nucleotide by Position in CDNA Adenine in CDNA Cytosine in CDNA Guanine in CDNA Thymine in CDNA Gene Names Transcript names Chromosome Strand Motifs K-Mers 5' UTR Data5' UTR Length CpG-Island in 5' UTR GC-Content in 5' UTR Nucleotide by Position in 5' UTR Adenine in 5' UTR Cytosine in 5' UTR Guanine in 5' UTR Thymine in 5' UTR Gene Names Transcript names Chromosome Strand Motifs K-Mers 3' UTR Data3' UTR Length CpG-Island in 3' UTR GC-Content in 3' UTR Nucleotide by Position in 3' UTR Adenine in 3' UTR Cytosine in 3' UTR Guanine in 3' UTR Thymine in 3' UTR Gene Names Transcript names Chromosome Strand Motifs K-Mers
Please cite: JetGene: Internet Resource for Analysis of Regulatory Regions or Nucleotide Contexts in Differentially Translated Plant Transcripts.
N. S. Sadovskaya, O. N. Mustafaev, A. A. Tyurin, I. V. Deineko & I. V. Goldenkova-Pavlova
Russian Journal of Plant Physiology volume 68, pages 633–640 (2021)