Plants : Populus trichocarpa

WGS Analysis tools

Division: Plants

Species name: Populus trichocarpa

Assembly: Pop_tri_v3

CDS quantity in database: 73012

CDNA quantity in database: 73012

3' UTR quantity in database: 0

5' UTR quantity in database: 0

Last update: 2023-03-24

Data source: Ensembl

Lineage:

Eukaryota (43) → Viridiplantae (40) → Streptophyta (38) → Streptophytina (38) → Embryophyta (38) → Tracheophyta (37) → Euphyllophyta (36) → Spermatophyta (36) → Magnoliophyta (36) → Mesangiospermae (35) → eudicotyledons (15) → Gunneridae (15) → Pentapetalae (15) → rosids (12) → fabids (5) → Malpighiales (1) → Salicaceae (1) → Saliceae (1) → Populus (1)


Sequence properties GOGene Ontology Annotations CDS DataSeq distr Codon Usage AminoAcid Position Codon Position CDS Length CpG-Island in CDS GC-Content in CDS Nucleotide by Position in CDS Adenine in CDS Cytosine in CDS Guanine in CDS Thymine in CDS Gene Names Transcript names Chromosome Strand Motifs K-Mers CDNA DataCDNA Length CpG-Island in CDNA GC-Content in CNDA Nucleotide by Position in CDNA Adenine in CDNA Cytosine in CDNA Guanine in CDNA Thymine in CDNA Gene Names Transcript names Chromosome Strand Motifs K-Mers
Please cite: JetGene: Internet Resource for Analysis of Regulatory Regions or Nucleotide Contexts in Differentially Translated Plant Transcripts.
N. S. Sadovskaya, O. N. Mustafaev, A. A. Tyurin, I. V. Deineko & I. V. Goldenkova-Pavlova
Russian Journal of Plant Physiology volume 68, pages 633–640 (2021)