Plants : Oryza sativa

CDNA Length

Sequence Distribution depending on CDNA Length

Chart type: Bar (Switch to line)

Block size:

Values interval to calculate data

Values: From to

Genome statistics

Sequence count
Genome total	42582
Filtered set	35 (no filters used)
Correlation	0.94

View sequences in FASTA

#	CDNA Length	In Genome	In Selected Set
1	0 to 500 bp	2572	5
2	500 to 1000 bp	9653	8
3	1000 to 1500 bp	10823	10
4	1500 to 2000 bp	8627	9
5	2000 to 2500 bp	4736	1
6	2500 to 3000 bp	2821	0
7	3000 to 3500 bp	1714	2
8	3500 to 4000 bp	918	0
9	4000 to 4500 bp	438	0
10	4500 to 5000 bp	211	0
11	5000 to 5500 bp	131	0
12	5500 to 6000 bp	56	0
13	6000 to 6500 bp	38	0
14	6500 to 7000 bp	18	0
15	7000 to 7500 bp	17	0
16	7500 to 8000 bp	9	0
17	8000 to 8500 bp	2	0
18	9500 to 10000 bp	1	0
19	11500 to 12000 bp	1	0
20	13500 to 14000 bp	1	0
21	15000 to 15500 bp	1	0
22	16000 to 16500 bp	1	0

Sequence properties GO Gene Ontology Annotations CDS DataSeq distr Codon Usage AminoAcid Position Codon Position CDS Length CpG-Island in CDS GC-Content in CDS Nucleotide by Position in CDS Adenine in CDS Cytosine in CDS Guanine in CDS Thymine in CDS Gene Names Transcript names Chromosome Strand Motifs K-Mers CDNA DataCDNA Length CpG-Island in CDNA GC-Content in CNDA Nucleotide by Position in CDNA Adenine in CDNA Cytosine in CDNA Guanine in CDNA Thymine in CDNA Gene Names Transcript names Chromosome Strand Motifs K-Mers 5' UTR Data5' UTR Length CpG-Island in 5' UTR GC-Content in 5' UTR Nucleotide by Position in 5' UTR Adenine in 5' UTR Cytosine in 5' UTR Guanine in 5' UTR Thymine in 5' UTR Gene Names Transcript names Chromosome Strand Motifs K-Mers 3' UTR Data3' UTR Length CpG-Island in 3' UTR GC-Content in 3' UTR Nucleotide by Position in 3' UTR Adenine in 3' UTR Cytosine in 3' UTR Guanine in 3' UTR Thymine in 3' UTR Gene Names Transcript names Chromosome Strand Motifs K-Mers

Please cite: JetGene: Internet Resource for Analysis of Regulatory Regions or Nucleotide Contexts in Differentially Translated Plant Transcripts.
N. S. Sadovskaya, O. N. Mustafaev, A. A. Tyurin, I. V. Deineko & I. V. Goldenkova-Pavlova
Russian Journal of Plant Physiology volume 68, pages 633–640 (2021)