Fungi : Botrytis cinerea

CpG-Island in 5' UTR

Sequence Distribution depending on CpG-Island concentration in 5' Untranslated Region
Chart type: Bar (Switch to line)

Sequence region to calculate data (%)




Sequence Region (%): From to

Block size:

Values interval to calculate data




Values: From to




Genome statistics
Sequence count
Genome total13628
Filtered set13628 (no filters used)
Correlation1
View sequences in FASTA
#CpG-Island concentration (%)In GenomeIn Selected Set
1 0680680
2 1970970
3 222942294
4 333843384
5 433643364
6 518891889
7 6677677
8 7192192
9 89898
10 93737
11 102121
12 111111
13 1255
14 1333
15 1411
16 1611
17 1711

 
Sequence properties CDS DataSeq distr Codon Usage AminoAcid Position Codon Position CDS Length CpG-Island in CDS GC-Content in CDS Nucleotide by Position in CDS Adenine in CDS Cytosine in CDS Guanine in CDS Thymine in CDS Gene Names Transcript names Chromosome Strand Motifs K-Mers CDNA DataCDNA Length CpG-Island in CDNA GC-Content in CNDA Nucleotide by Position in CDNA Adenine in CDNA Cytosine in CDNA Guanine in CDNA Thymine in CDNA Gene Names Transcript names Chromosome Strand Motifs K-Mers 5' UTR Data5' UTR Length CpG-Island in 5' UTR GC-Content in 5' UTR Nucleotide by Position in 5' UTR Adenine in 5' UTR Cytosine in 5' UTR Guanine in 5' UTR Thymine in 5' UTR Gene Names Transcript names Chromosome Strand Motifs K-Mers 3' UTR Data3' UTR Length CpG-Island in 3' UTR GC-Content in 3' UTR Nucleotide by Position in 3' UTR Adenine in 3' UTR Cytosine in 3' UTR Guanine in 3' UTR Thymine in 3' UTR Gene Names Transcript names Chromosome Strand Motifs K-Mers
Please cite: JetGene: Internet Resource for Analysis of Regulatory Regions or Nucleotide Contexts in Differentially Translated Plant Transcripts.
N. S. Sadovskaya, O. N. Mustafaev, A. A. Tyurin, I. V. Deineko & I. V. Goldenkova-Pavlova
Russian Journal of Plant Physiology volume 68, pages 633–640 (2021)